Journal Papers: Last 5 Years
Author: O. Plata

2024

Exploring Multiprocessor Approaches to Time Series Analysis [doi]
R. Quislant, E. Gutierrez, O. Plata
Journal of Parallel and Distributed Computing, 188, June 2024, 104855

Advancements in Long-Read Genome Sequencing Technologies and Algorithms [doi]
E. Espinosa, R. Bautista, R. Larrosa, O. Plata
Genomics, 116 (3), May 2024, 110842

MATSA: An MRAM-Based Energy-Efficient Accelerator for Time Series Analysis [doi]
I. Fernandez, C. Giannoula, A. Manglik, R. Quislant, N.M. Ghiasi, J.G. Luna, E. Gutierrez, O. Plata, O. Mutlu
IEEE Access, 12, March 2024, pp. 2169-3536

2023

Comparing Assembly Strategies for Third-Generation Sequencing Technologies Across Different Genomes [doi]
E. Espinosa, R. Bautista, I. Fernandez, R. Larrosa, E.L. Zapata, O. Plata
Genomics, 115 (5), September 2023, 110700

Time Series Analysis Acceleration with Advanced Vectorization Extensions [doi]
R. Quislant, I. Fernandez, E. Gutierrez, O. Plata
The Journal of Supercomputing, 79, February 2023, pp. 10178-10207

2022

TraTSA: A Transprecision Framework for Efficient Time Series Analysis [doi]
I. Fernandez, R. Quislant, S. Gonzalez-Navarro, E. Gutierrez, O. Plata
Journal of Computational Science, 63, September 2022, 101784

Speculative Barriers with Transactional Memory [doi]
M. Pedrero, R. Quislant, E. Gutierrez, E.L. Zapata, O. Plata
IEEE Transactions on Computers, 71 (1), January 2022, pp. 197-208

2021

Genome Sequence Alignment - Design Space Exploration for Optimal Performance and Energy Architectures [doi]
Y.M. Qureshi, J.M. Herruzo, M. Zapater, K. Olcoz, S. Gonzalez-Navarro, O. Plata, D. Atienza
IEEE Transactions on Computers, 70 (12), December 2021, pp. 2218-2233

An Abstract Machine Approach to Preserving Digital Information [doi]
I. Rummelhoff, E. Gutierrez, T. Kristoffersen, O. Liabo, B.M. Ostvold, O. Plata, S. Romero
IEEE Access, 9, November 2021, pp. 154914-154932

Enabling Fast and Energy-Efficient FM-index Exact Matching Using Processing-Near-Memory [doi]
J.M. Herruzo, I. Fernandez, S. Gonzalez-Navarro, O. Plata
The Journal of Supercomputing, 77, September 2021, pp. 10226-10251

2020

Accelerating Sequence Alignments Based on FM-Index Using the Intel KNL Processor [doi]
J.M. Herruzo, S. Gonzalez-Navarro, P. Ibañez, V. Viñals, J. Alastruey, O. Plata
IEEE/ACM Transactions on Computational Biology and Bioinformatics, 17 (4), July-August 2020, pp. 1093-1104