All Papers
Author: A. Rodriguez

2022

Lightweight Asynchronous Scheduling in Heterogeneous Reconfigurable Systems [doi]
A. Rodriguez, A. Navarro, K. Nikov, J. Nunez-Yanez, R. Gran, D. Suarez-Gracia, R. Asenjo
Journal of Systems Architecture, 124, March 2022, 102398

2021

Efficient Heterogeneous Matrix Profile on a CPU + High Performance FPGA with Integrated HBM [doi]
J.C. Romero, A. Navarro, A. Vilches, A. Rodriguez, F. Corbera, R. Asenjo
Future Generation Computer Systems, 125, December 2021, pp. 10-23

2020

ScrimpCo: Scalable Matrix Profile on Commodity Heterogeneous Processors [doi]
J.C. Romero, A. Vilches, A. Rodriguez, A. Navarro, R. Asenjo
The Journal of Supercomputing, 76, November 2020, pp. 9189-9210

Parallel Multiprocessing and Scheduling on the Heterogeneous Xeon+FPGA Platform [doi]
A. Rodriguez, A. Navarro, R. Asenjo, F. Corbera, R. Gran, D. Suarez, J. Nuñez-Yañez
The Journal of Supercomputing, 76, June 2020, pp. 4645-4665

High-Performance Simultaneous Multiprocessing for Heterogeneous System-on-Chip [link]
K. Nikov, J. Nunez-Yanez, M. Hosseinabady, R. Asenjo, A. Rodriguez, A. Navarro
The Thirteenth International Workshop on Programmability and Architectures for Heterogeneous Multicores (MULTIPROG'20) (co-located with HiPEAC'20), Bologna (Italy), January 2020

2019

Exploring Heterogeneous Scheduling for Edge Computing with CPU and FPGA MPSoCs [doi]
A. Rodriguez, A. Navarro, R. Asenjo, F. Corbera, R. Gran, D. Suarez, J. Nuñez-Yañez
Journal of Systems Architecture, 98, September 2019, pp. 27-40

Soporte OpenCL 2.0 para Intel TBB [link]
F. Muñoz, J.C. Romero, A. Villegas, A. Navarro, A. Rodriguez, R. Asenjo
XIX Jornadas de Paralelismo (JJPP'19) (parte de las Jornadas Sarteco), Caceres (Spain), September 2019

Simultaneous Multiprocessing in a Software-Defined Heterogeneous FPGA [doi]
J. Nunez-Yanez, S. Amiri, M. Hosseinabady, A. Rodriguez, R. Asenjo, A. Navarro, D. Suarez-Gracia, R. Gran-Tejero
The Journal of Supercomputing, 75, August 2019, pp. 4078-4095

Time Series Heterogeneous Co-execution on CPU+GPU [link]
J.C. Romero, A. Navarro, A. Rodriguez, R. Asenjo, M. Cole
International Conference on Computational and Mathematical Methods in Science and Engineering (CMMSE'19), Rota (Cadiz, Spain), June-July 2019

Designing a Project for Learning Industry 4.0 by Applying IoT to Urban Garden [doi]
J. Hormigo, A. Rodriguez
IEEE Revista Iberoamericana de Tecnologias del Aprendizaje, 14 (2), May 2019, pp. 58-65

Heterogeneous parallel_for Template for CPU-GPU Chips [doi]
A. Navarro, F. Corbera, A. Rodriguez, A. Vilches, R. Asenjo
International Journal of Parallel Programming, 47 (2), April 2019, pp. 231-233

Evaluation of Heterogeneous Execution on an HPC-Oriented CPU-FPGA System-on-Chip [link]
A. Rodriguez, A. Navarro, R. Asenjo, F. Corbera, R. Gran-Tejero, D. Suarez-Gracia, J. Nunez-Yanez
International Workshop on High-Level Programming for Heterogeneous and Hierarchical Parallel Systems (HLPGPU’19) (co-located with HiPEAC'19), Valencia (Spain), January 2019

2018

Energy-Aware Acceleration on GPUs: Findings on a Bioinformatics Benchmark [doi]
J. Perez-Serrano, A. Rodriguez, J.F. Chico, D. Lopez-Rodriguez, M. Ujaldon
Journal on Sustainable Computing: Informatics and Systems, 20, December 2018, pp. 88-101

Time Series Collaborative Execution on CPU+GPU Chips [link]
J.C. Romero, A. Navarro, A. Rodriguez, R. Asenjo, C. Murray
HPC-Europa3 Transnational Access Visitors Meeting (TAM'18), Edinburgh (UK), October 2018

Explotando el Nuevo Modulo OpenCL de Intel TBB [link]
J.C. Romero, A. Villegas, A. Navarro, A. Rodriguez, R. Asenjo
XIX Jornadas de Paralelismo (JJPP'18) (parte de las Jornadas Sarteco), Teruel (Spain), September 2018

Workload Partitioning Strategy for Improved Parallelism on FPGA-CPU Heterogeneous Chips [doi]
S. Amiri, M. Hosseinabady, A. Rodriguez, R. Asenjo, A. Navarro, J. Nunez-Yanez
28th International Conference on Field Programmable Logic and Applications (FPL’18), Dublin (Ireland), August 2018

Project Based Learning on Industrial Informatics: Applying IoT to Urban Garden [doi]
J. Hormigo, A. Rodriguez
XIII Technologies Applied to Electronics Teaching Conference (TAEE'18), La Laguna (Spain), June 2018

Parallelizing Workload Execution in Embedded and High-Performance Heterogeneous Systems [link]
J. Nunez-Yanez, M. Hosseinabady, M. Amiri, A. Rodriguez, R. Asenjo, A. Navarro, R. Gran-Tejero, D. Suarez-Gracia
6th International Workshop on High Performance Energy Efficient Embedded Systems (HIP3ES’18) (co-located with HiPEAC'18), Manchester (UK), January 2018

2017

Simultaneous Multiprocessing on a FPGA+CPU Heterogeneous System-On-Chip [doi]
J. Nuñez-Yañez, M. Hosseinabady, A. Rodriguez, R. Asenjo, A. Navarro, R. Gran-Tejero, D. Suarez-Gracia
3rd International Workshop on Reengineering for Parallelism in Heterogeneous Parallel Platforms (RePara’17) (co-located with ParCo'17), Bologna (Italy), September 2017
(Advances in Parallel Computing, Vol. 32: Parallel Computing is Everywhere, IOS Press, J.D. Garcia, Ed., pp. 677-686)

Motivando al Alumno de Ingeniería Mediante la Plataforma Raspberry Pi [link]
R. Asenjo, S. Gonzalez-Navarro, F. Corbera, A. Navarro, A. Rodriguez, J. Villalba, E.M.T. Hendrix
XXVIII Jornadas de Paralelismo (JJPP'17) (parte de las Jornadas Sarteco), Malaga (Spain), September 2017

Heterogeneous Parallel for Template Based on TBB [link]
A. Vilches, A. Navarro, F. Corbera, A. Rodriguez, R. Asenjo
10th International Symposium on High-Level Parallel Programming and Applications (HLPP'17), Valladolid (Spain), July 2017

2016

2015

Patrón pipeline Aplicado a Arquitecturas Heterogéneas big.LITTLE [link]
A. Vilches, A. Rodriguez, A. Navarro, F. Corbera, R. Asenjo
XXVI Jornadas de Paralelismo (JJPP'15) (parte de las Jornadas Sarteco), Cordoba (Spain), September 2015

Workload Distribution and Balancing in FPGAs and CPUs with OpenCL and TBB [doi]
R. Asenjo, A. Navarro, A. Rodriguez, J. Nunez-Yanez
International Symposium on Parallel Computing with FPGAs (ParaFPGA’15) (co-located with ParCo'15), Edinburgh, UK, September 2015
(IOS Press, Advances in Parallel Computing, Vol. 27: Parallel Computing: On the Road to Exascale, pp. 543-551, 2016)

Parallel Pipeline on Heterogeneous Multi-Processing Architectures [doi]
A. Rodriguez, A. Navarro, R. Asenjo, A. Vilches, F. Corbera, M. Garzaran
1st IEEE International Workshop on Reengineering for Parallelism in Heterogeneous Parallel Platforms (RePara’15) (co-located with ISPA’15), Helsinki, Finland, August 2015

Reducing Overheads of Dynamic Scheduling on Heterogeneous Chips [link]
F. Corbera, A. Rodriguez, R. Asenjo, A. Navarro, A. Vilches, M.J. Garzaran
Workshop on High Performance Energy Efficient Embedded Systems (HIP3ES’15) (co-located with HiPEAC’15), Amsterdam (The Netherlands), January 2015

2014

On the Parallelization of a Three-Parametric Log-Logistic Estimation Algorithm [link]
R. Asenjo, A. Rodriguez, A. Navarro, J.A. Fernandez-Madrigal, A. Cruz-Martin
V Jornadas de Computación Empotrada (JCE'14) (parte de las Jornadas Sarteco), Valladolid (Spain), September 2014

Applying Dynamic Parallelism to High Performance Normalization of Gene Expressions”
R.P. Souto, D. Augusto, P.L. Silva, C. Osthoff, A.T. Vasconcelos, O. Trelles, A. Rodriguez, M. Ujaldon
GPU Technology Conference (GTC’2014), San Jose (CA), USA, March 2014

2013

Applying Dynamic Parallelism to High Performance Normalization of Gene Expressions [link]
R.P. Souto, C. Osthoff, A.T. Ribeiro de Vasconcelos, D.A. Augusto, P.L. da Silva Dias, A. Rodriguez, O. Trelles, M. Ujaldon
4th Workshop on Applications for Multi-Core Architectures (WAMCA'13) (co-located with SBAC-PAD'13), Porto de Galinhas (Brasil), October 2013

Validación del Software PENAUT para el Análisis de Matrices de Proteínas
A. Rodriguez, M. Cano-Castillo, R. Martinez, M.L. Sanz, O. Trelles
Simposio Internacional de Alergia a Himenópteros, Granada (Spain), October 2013

Out of Core Computation of HSPs for Large Biological Sequences [doi]
A. Rodriguez, O. Torreño, O. Trelles
12th International Work-Conference on Artificial Neural Networks (IWANN'13), Puerto de la Cruz, Tenerife (Spain), June 2013
(Springer, LNCS 7903, I. Rojas, G. Joya and J. Cabestany, Eds., pp. 189-199)

2012

2011

Using Graphics Processors for a High Performance Normalization of Gene Expressions [doi]
A. Rodriguez, O. Trelles, M. Ujaldon
13th IEEE International Conference on High Performance Computing and Communications (HPCC’11), Banff (Canada), September 2011

2010

2009

Qnorm: A Library of Parallel Methods for Gene-Expression Q-Normalization [link]
J.M. Mateos-Duran, P. Prins, A. Rodriguez, O. Trelles
The Bioinformatics Open Source Conference (BOSC'09), Stockholm, Sweden, June 2009

Role of Motility and Chemotaxis in the Pathogenesis of Dickeya Dadantii 3937 (ex Erwinia Chrysanthemi 3937) [doi]
M. Antunez, E. Cabrera, E. Lopez, R. Raposo, O. Trelles, A. Rodriguez, P. Rodriguez
Microbiology, 155 (Pt. 2), February 2009, pp. 434-442

2008

2007

2006

Integrated Analysis of Gene Expression by Association Rules Discovery [doi]
P. Carmona-Saez, M. Chagoyen, A. Rodriguez, O. Trelles, J.M. Carazo, A. Pascual-Montano
BMC Bioinformatics, 7:54, February 2006

2005

Mining Association Rules from Biological Databases [doi]
A. Rodriguez, J.M. Carazo, O. Trelles
Journal of the American Society for Information Science and Technology, 56 (5), March 2005, pp. 493–504

Adaptive Task Scheduling in Computational GRID Environments [doi]
M. Hidalgo-Conde, A. Rodriguez, S. Ramirez, O. Trelles
European GRID Conference (ECG 2005), Amsterdan (The Netherlands), February 2005
(Springer, LNCS 3470, P.M.A. Sloot, A.G. Hoekstra, T. Priol, A. Reinefeld and M. Bubak, Eds., pp. 880-890)

Analysis and Description of the Semantic Content of Cell Biological Videos [doi]
A. Rodriguez, N. Guil, D.M. Shotton, O. Trelles
Multimedia Tools and Applications, 25 (1), January 2005, pp. 37-58

2004

Planificación Adaptativa en Entornos GRID
J. Garcia de la Nava, O. Trelles, M. Hidalgo, A. Rodriguez
XV Jornadas de Paralelismo (JJPP'04), Almeria (Spain), September 2004

Automatic Tracking Analysis in Morris Water Maze Biomedical Videos
A. Rodriguez, A. Ortega, A. Sola, J.A. Mico, O. Trelles,
4th IASTED International Conference on Visualization, Imaging and Image Processing, Marbella (Spain), September 2004

Integrating GO Annotations with Expression Data to Analyze Microarray Experiments
P. Carmona-Saez, M. Chagoyen, A. Rodriguez, O. Trelles, J.M. Carazo, A. Pascual-Montano
Workshop on Data Mining in Functional Genomics and Proteomics: Current Trends and Future Directions (co-located with ECAI'04), Valencia (Spain), August 2004

Automatic Analysis of the Content of Cell Biological Video and Database Organization of their Metadata Descriptors [doi]
A. Rodriguez, N. Guil, D.M. Shotton, O. Trelles
IEEE Transactions on Multimedia, 6 (1), February 2004, pp. 119-128

2003

2002

Asignación Funcional de Proteinas Utilizando una Base de Datos de Keywords Jerarquizadas
A.J. Perez, G. Thode, A. Rodriguez, O. Trelles
III Jornadas de Bioinfomatica, Salamanca (Spain), September 2002

A Computational Strategy for Protein Function Assignment which Addresses the Multidomain Problem [doi]
A.J. Perez, A. Rodriguez, O. Trelles, G. Thode
Comparative and Functional Genomics, 3 (5), August 2002, pp. 423-440

A Metadata Classification Schema for Semantic Content Analysis of Videos [doi]
D.M. Shotton, A. Rodriguez, N. Guil, O. Trelles
Journal of Microscopy, 205 (Pt 1), January 2002, pp. 33-42

2001

Optimización del Clustering de Perfiles de Expresion Génica
O. Perez, J. Garcia de la Nava, A. Rodriguez, O. Trelles
XII Jornadas de Paralelismo (JJPP'01), Valencia (Spain), September 2001

Comparación de Estructuras 3D Considerando los Entornos de los Aminoácidos
A. Rodriguez, N. Jimenez, J.M. Carazo, O. Trelles
II Jornadas de Bioinformatica, Malaga (Spain), May-June 2001

Aplicación de Extracción de Reglas Asociativas a Bases de Datos Biológicas
A. Rodriguez, J.M. Carazo, O. Trelles
II Jornadas de Bioinformatica, Malaga (Spain), May-June 2001

2000

Object Tracking and Event Recognition in Biological Microscopy Videos [doi]
D.M. Shotton, A. Rodriguez, N. Guil, O. Trelles
15th International Conference on Pattern Recognition (ICPR'00), Barcelona (Spain), September 2000

Mining Low-Level Similarity Signals from Sequence Databases
A. Rodriguez, A. Perez-Pulido, A.D. Lopez, G. Thode, J.M. Carazo, O. Trelles
4th World Multiconference on Systemics, Cybernetics and Informatics (SCI'2000) and The 6th International Conference on Information Systems, Analysis and Synthesis (ISAS'00), Orlando (FL, USA), July 2000

Automatic Feature Extraction in Wound Healing Videos
A. Rodriguez, D.M. Shotton, O. Trelles, N. Guil
6th RIAO Conference on Content-Based Multimedia Information Access (RIAO'00), Paris (France), April 2000

Automatic Tracking of Moving Bacterial Cells in Scientific Videos
A. Rodriguez, D.M. Shotton, N. Guil, O. Trelles
6th RIAO Conference on Content-Based Multimedia Information Access (RIAO'00), Paris (France), April 2000

1999

1998

A Computer Model for the Analysis of DNA Replication Intermediates by Two-Dimensional Agarose Gel Electrophoresis [doi]
E. Viguera, A. Rodriguez, P. Hernandez, D.B. Krimer, O. Trelles, J.B. Schvartzman
Gene, 217 (1-2), September 1998, pp. 41-49

Biological Sequence Analysis on Distributed-Shared Memory Multiprocessors [doi]
A. Rodriguez, L.G. de la Fraga, E.L. Zapata, J.M. Carazo, O. Trelles
6th Euromicro WorkShop on Parallel and Distributed Processing (PDP'98), Madrid (Spain), January 1998

1997

Paralelismo de Tareas en el Analisis de Secuencias Biologicas
A. Rodriguez, L.G. de la Fraga, E.L. Zapata, J.M. Carazo, O. Trelles
VIII Jornadas de Paralelismo (JJPP'97), Caceres (Spain), September 1997

1996

Herramientas Computacionales de Visualizacion de la Accion del Laser sobre la Piel
O. Trelles, A. Rodriguez, F. Romero
XXXI Congreso de la Sociedad Española de Cirugia Plastica, Reparadora y Estetica, Madrid (Spain), September 1996

Skin Rejuvenation by Laser
M.A. Trelles, A. Rodriguez, O. Trelles, J. Rigau
International Laser Congress: Lasers at the Dawn of the Third Millenium, Athens (Greece), 1996

1995

Computational Demands for Laser-Tissue Interaction Modelling [doi]
F. Romero, A. Rodriguez, M.A. Trelles, O. Trelles
SPIE European Conference on Biomedical Optics (BIOS Europe'95), Barcelona (Spain), September 1995
(SPIE Vol. 2624, Laser/Tissue Interaction in Tissue Optics, 1996)

Modelado del Analisis de la Replicacion del ADN por Electroforesis Bidimensional en Geles de Agarosa
A. Rodriguez, E. Viguera, P. Hernandez, J.B. Scwartzman, O. Trelles
Primeras Jornadas de Informatica, Puerto de la Cruz (Tenerife, Spain), July 1995

Que Hay de Nuevo en Laser Cirugia
M.A. Trelles, O. Trelles, A. Rodriguez, J. Rigau, J. Coates
XI Congreso Nacional de la Sociedad Española de Medicina Estetica, Barcelona (Spain), June 1995

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